# AWS::Omics Construct Library

This module is part of the [AWS Cloud Development Kit](https://github.com/aws/aws-cdk) project.

```ts
import * as omics from 'aws-cdk-lib/aws-omics';
```

There are no official hand-written ([L2](https://docs.aws.amazon.com/cdk/latest/guide/constructs.html#constructs_lib)) constructs for this service yet. Here are some suggestions on how to proceed:

- Search [Construct Hub for Omics construct libraries](https://constructs.dev/search?q=omics)
- Use the automatically generated [L1](https://docs.aws.amazon.com/cdk/latest/guide/constructs.html#constructs_l1_using) constructs, in the same way you would use [the CloudFormation AWS::Omics resources](https://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/AWS_Omics.html) directly.

There are no hand-written ([L2](https://docs.aws.amazon.com/cdk/latest/guide/constructs.html#constructs_lib)) constructs for this service yet.
However, you can still use the automatically generated [L1](https://docs.aws.amazon.com/cdk/latest/guide/constructs.html#constructs_l1_using) constructs, and use this service exactly as you would using CloudFormation directly.

For more information on the resources and properties available for this service, see the [CloudFormation documentation for AWS::Omics](https://docs.aws.amazon.com/AWSCloudFormation/latest/UserGuide/AWS_Omics.html).

(Read the [CDK Contributing Guide](https://github.com/aws/aws-cdk/blob/main/CONTRIBUTING.md) and submit an RFC if you are interested in contributing to this construct library.)

## Types

| Name | Kind | Summary |
| --- | --- | --- |
| [`CfnAnnotationStore`](/v2/docs/aws-cdk-lib.aws_omics.CfnAnnotationStore) | Construct (L1) | > AWS HealthOmics variant stores and annotation stores are no longer open to new customers. |
| [`CfnConfiguration`](/v2/docs/aws-cdk-lib.aws_omics.CfnConfiguration) | Construct (L1) | Resource schema for AWS::Omics::Configuration. |
| [`CfnReferenceStore`](/v2/docs/aws-cdk-lib.aws_omics.CfnReferenceStore) | Construct (L1) | Creates a reference store. |
| [`CfnRunCache`](/v2/docs/aws-cdk-lib.aws_omics.CfnRunCache) | Construct (L1) | Definition of AWS::Omics::RunCache Resource Type. |
| [`CfnRunGroup`](/v2/docs/aws-cdk-lib.aws_omics.CfnRunGroup) | Construct (L1) | Creates a run group to limit the compute resources for the runs that are added to the group. |
| [`CfnSequenceStore`](/v2/docs/aws-cdk-lib.aws_omics.CfnSequenceStore) | Construct (L1) | Creates a sequence store. |
| [`CfnVariantStore`](/v2/docs/aws-cdk-lib.aws_omics.CfnVariantStore) | Construct (L1) | Create a store for variant data. |
| [`CfnWorkflow`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflow) | Construct (L1) | Creates a private workflow. Before you create a private workflow, you must create and configure these required resources:. |
| [`CfnWorkflowVersion`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflowVersion) | Construct (L1) | Creates a new workflow version for the workflow that you specify with the `workflowId` parameter. |
| [`CfnAnnotationStore.ReferenceItemProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnAnnotationStore.ReferenceItemProperty) | Struct | A genome reference. |
| [`CfnAnnotationStore.SseConfigProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnAnnotationStore.SseConfigProperty) | Struct | Server-side encryption (SSE) settings for a store. |
| [`CfnAnnotationStore.StoreOptionsProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnAnnotationStore.StoreOptionsProperty) | Struct | The store's file parsing options. |
| [`CfnAnnotationStore.TsvStoreOptionsProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnAnnotationStore.TsvStoreOptionsProperty) | Struct | The store's parsing options. |
| [`CfnAnnotationStoreProps`](/v2/docs/aws-cdk-lib.aws_omics.CfnAnnotationStoreProps) | Struct | Properties for defining a `CfnAnnotationStore`. |
| [`CfnConfiguration.RunConfigurationsProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnConfiguration.RunConfigurationsProperty) | Struct |  |
| [`CfnConfiguration.VpcConfigProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnConfiguration.VpcConfigProperty) | Struct |  |
| [`CfnConfigurationProps`](/v2/docs/aws-cdk-lib.aws_omics.CfnConfigurationProps) | Struct | Properties for defining a `CfnConfiguration`. |
| [`CfnReferenceStore.SseConfigProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnReferenceStore.SseConfigProperty) | Struct | Server-side encryption (SSE) settings for a store. |
| [`CfnReferenceStoreProps`](/v2/docs/aws-cdk-lib.aws_omics.CfnReferenceStoreProps) | Struct | Properties for defining a `CfnReferenceStore`. |
| [`CfnRunCacheProps`](/v2/docs/aws-cdk-lib.aws_omics.CfnRunCacheProps) | Struct | Properties for defining a `CfnRunCache`. |
| [`CfnRunGroupProps`](/v2/docs/aws-cdk-lib.aws_omics.CfnRunGroupProps) | Struct | Properties for defining a `CfnRunGroup`. |
| [`CfnSequenceStore.SseConfigProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnSequenceStore.SseConfigProperty) | Struct | Server-side encryption (SSE) settings for a store. |
| [`CfnSequenceStoreProps`](/v2/docs/aws-cdk-lib.aws_omics.CfnSequenceStoreProps) | Struct | Properties for defining a `CfnSequenceStore`. |
| [`CfnVariantStore.ReferenceItemProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnVariantStore.ReferenceItemProperty) | Struct | The read set's genome reference ARN. |
| [`CfnVariantStore.SseConfigProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnVariantStore.SseConfigProperty) | Struct | Server-side encryption (SSE) settings for a store. |
| [`CfnVariantStoreProps`](/v2/docs/aws-cdk-lib.aws_omics.CfnVariantStoreProps) | Struct | Properties for defining a `CfnVariantStore`. |
| [`CfnWorkflow.ContainerRegistryMapProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflow.ContainerRegistryMapProperty) | Struct | Use a container registry map to specify mappings between the ECR private repository and one or more upstream registries. |
| [`CfnWorkflow.DefinitionRepositoryProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflow.DefinitionRepositoryProperty) | Struct | Contains information about a source code repository that hosts the workflow definition files. |
| [`CfnWorkflow.ImageMappingProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflow.ImageMappingProperty) | Struct | Specifies image mappings that workflow tasks can use. |
| [`CfnWorkflow.RegistryMappingProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflow.RegistryMappingProperty) | Struct | If you are using the ECR pull through cache feature, the registry mapping maps between the ECR repository and the upstream registry where container images are pulled and synchronized. |
| [`CfnWorkflow.SourceReferenceProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflow.SourceReferenceProperty) | Struct | Contains information about the source reference in a code repository, such as a branch, tag, or commit. |
| [`CfnWorkflow.WorkflowParameterProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflow.WorkflowParameterProperty) | Struct | A workflow parameter. |
| [`CfnWorkflowProps`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflowProps) | Struct | Properties for defining a `CfnWorkflow`. |
| [`CfnWorkflowVersion.ContainerRegistryMapProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflowVersion.ContainerRegistryMapProperty) | Struct | Use a container registry map to specify mappings between the ECR private repository and one or more upstream registries. |
| [`CfnWorkflowVersion.DefinitionRepositoryProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflowVersion.DefinitionRepositoryProperty) | Struct | Contains information about a source code repository that hosts the workflow definition files. |
| [`CfnWorkflowVersion.ImageMappingProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflowVersion.ImageMappingProperty) | Struct | Specifies image mappings that workflow tasks can use. |
| [`CfnWorkflowVersion.RegistryMappingProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflowVersion.RegistryMappingProperty) | Struct | If you are using the ECR pull through cache feature, the registry mapping maps between the ECR repository and the upstream registry where container images are pulled and synchronized. |
| [`CfnWorkflowVersion.SourceReferenceProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflowVersion.SourceReferenceProperty) | Struct | Contains information about the source reference in a code repository, such as a branch, tag, or commit. |
| [`CfnWorkflowVersion.WorkflowParameterProperty`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflowVersion.WorkflowParameterProperty) | Struct | A workflow parameter. |
| [`CfnWorkflowVersionProps`](/v2/docs/aws-cdk-lib.aws_omics.CfnWorkflowVersionProps) | Struct | Properties for defining a `CfnWorkflowVersion`. |